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Chromatin structure profile data from DNS-seq

Permalink: http://purl.flvc.org/fsu/fd/FSU_pmch_30175199
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Turpin, Z. M., Vera, D. L., Savadel, S. D., Lung, P. -Y., Wear, E. E., Mickelson-Young, L., … Bass, H. W. (2018). Chromatin structure profile data from DNS-seq: Differential nuclease sensitivity mapping of four reference tissues of B73 maize ( L). Data In Brief. Retrieved from http://purl.flvc.org/fsu/fd/FSU_pmch_30175199
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Full Title

Chromatin structure profile data from DNS-seq: Differential nuclease sensitivity mapping of four reference tissues of B73 maize ( L).

Names

Turpin, Zachary M (author)
Vera, Daniel L (author)
Savadel, Savannah D (author)
Lung, Pei-Yau (author)
Wear, Emily E (author)
Mickelson-Young, Leigh (author)
Thompson, William F (author)
Hanley-Bowdoin, Linda (author)
Dennis, Jonathan H (author)
Zhang, Jinfeng (author)
Bass, Hank W (author)

Format

journal article
text

Date Issued

2018-08-10

Abstract

Presented here are data from Next-Generation Sequencing of differential micrococcal nuclease digestions of formaldehyde-crosslinked chromatin in selected tissues of maize () inbred line B73. Supplemental materials include a wet-bench protocol for making DNS-seq libraries, the DNS-seq data processing pipeline for producing genome browser tracks. This report also includes the peak-calling pipeline using the iSeg algorithm to segment positive and negative peaks from the DNS-seq difference profiles. The data repository for the sequence data is the NCBI SRA, BioProject Accession 8.

Publication Note

This NIH-funded author manuscript originally appeared in PubMed Central at https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6117953.

DOI URL

https://doi.org/10.1016/j.dib.2018.08.015

Identifier

FSU_pmch_30175199
10.1016/j.dib.2018.08.015
PMC6117953
30175199
S2352-3409(18)30865-5

Language

English

Choose the citation style.
Turpin, Z. M., Vera, D. L., Savadel, S. D., Lung, P. -Y., Wear, E. E., Mickelson-Young, L., … Bass, H. W. (2018). Chromatin structure profile data from DNS-seq: Differential nuclease sensitivity mapping of four reference tissues of B73 maize ( L). Data In Brief. Retrieved from http://purl.flvc.org/fsu/fd/FSU_pmch_30175199

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